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PROTEIN: HRGMv2_1038_3_56

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Protein File & Metadata
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Source:
HRGMv2_1038_3_56.pdb
Genome ID:
HRGMv2_1038
Protein ID:
HRGMv2_1038_3_56

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Detailed structural information will appear here after analysis...

Protein Sequence 
MAMLSLSVVR   ETGETVYSTE   CKDEVTLSWR   GAYEPGDKLV   IHCDEAPVHL   VLKLDAALVE 60
SHVLMERDTF   EFPIPLGEGQ   KAYGKGWAFE   DERHYAYARI   EDAREAGAWR   CLSRNSCDYE 120
GARGVYPHAT   SNIPMDNPQF   IARNAIDGVI   ETSSHGSWPH   ESWGVAGRAD   AWLKIDFGEE 180
VVADELRLYL   RADFPHDTCW   ESAKLELSDG   SVLDLPLEKT   GERQTFDMGG   RRLSWVKIGQ 240
LVKRDEDGFP   GLSQIEVWGR   RGETAQNGGP   NDRFSGVAPQ   EGTDA 285
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0J9XVT6-F1-model_v4 28 275 13 213 0.5178 0.6392
AF-Q9I3J8-F1-model_v4 4 264 81 332 0.4923 0.607
AF-Q09913-F1-model_v4 4 264 93 342 0.4743 0.5956
AF-Q5AD02-F1-model_v4 3 262 88 342 0.4733 0.5852
AF-U7PMW0-F1-model_v4 4 263 100 358 0.4681 0.582
AF-A0A0R4ITS1-F1-model_v4 107 279 23 220 0.4483 0.7658
AF-A0A0K0ER77-F1-model_v4 1 277 49 420 0.3926 0.6073
AF-A0A0P0V4W3-F1-model_v4 12 271 34 412 0.3764 0.5267
AF-I1KZR2-F1-model_v4 45 285 99 356 0.3513 0.5404
AF-F4I316-F1-model_v4 13 283 145 427 0.3426 0.5049
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A2G4YLU0 CBM47 107 268 23 172 0.5454 0.8346
A0A9E9K109 CBM32 8 275 1 483 0.4372 0.6207
AF-A0A346DVI5-F1-model_v4 CBM47 6 266 7 436 0.4279 0.5793
AF-A0A6B9ZCG4-F1-model_v4 CBM32 2 262 260 467 0.4248 0.7116
AF-A0A6P1Q719-F1-model_v4 CBM47 6 266 31 436 0.4232 0.572
AF-C7JFL3-F1-model_v4 CBM47 7 267 9 437 0.4139 0.5602
C7JFL3 CBM47 7 267 9 437 0.4139 0.5602
AF-A0A1D8QTX8-F1-model_v4 CBM47 7 266 9 436 0.413 0.5609
AF-A0A5B9GFR0-F1-model_v4 CBM47 7 267 8 437 0.4127 0.5583
AF-A0A1M4E470-F1-model_v4 GH43_29 11 259 16 462 0.4023 0.5683
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A2G4YLU0 CBM47 107 268 23 172 0.5454 0.8346
B1C4D3 GH105 1 266 34 373 0.5434 0.9221
A0A9E9K109 CBM32 8 275 1 483 0.4372 0.6207
F2VQW1 CBM47 104 273 17 265 0.4358 0.7472
UVH36227.1 CBM47 2 265 194 490 0.4345 0.6155
C6W2B2 CBM32 1 260 265 478 0.425 0.6933
A0A6B9ZCG4 CBM32 2 262 260 467 0.4248 0.7116
C7JFL3 CBM47 7 267 9 437 0.4139 0.5602
A0A975PG29 CE20 3 263 109 664 0.3867 0.588
B3E2Q6 CBM47 22 269 20 287 0.3859 0.5764
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
1o59-assembly1.cif.gz_A 4 260 84 318 0.4688 0.6039
3cqo-assembly1.cif.gz_C 107 279 1 238 0.4671 0.7688
8ivw-assembly4.cif.gz_J 2 271 5 400 0.4347 0.5599
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A6V7Y9-F1-model_v4 3 264 81 332 0.4945 0.6102
AF-Q9I3J8-F1-model_v4 4 264 81 332 0.4923 0.607
AF-Q02JZ8-F1-model_v4 3 264 81 332 0.4918 0.6068
AF-B7UW33-F1-model_v4 3 264 81 332 0.4908 0.6052
AF-Q6LPX9-F1-model_v4 3 263 79 330 0.4874 0.6001
AF-Q87YX4-F1-model_v4 4 263 81 331 0.4874 0.6025
AF-Q3KFK9-F1-model_v4 4 263 81 331 0.487 0.6014
AF-Q48KS4-F1-model_v4 4 263 81 331 0.487 0.602
AF-A4VP32-F1-model_v4 3 263 81 331 0.4868 0.5997
AF-Q4K8H3-F1-model_v4 4 263 81 331 0.4861 0.6008
Download Full SwissProt Results