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Cluster: HRGMv2_1030_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1030_5 HRGMv2_1030_5_66 68007 69512 + GH77
CAZyme HRGMv2_1030_5 HRGMv2_1030_5_67 69641 71908 + GT35
TC HRGMv2_1030_5 HRGMv2_1030_5_68 72457 73656 - 3.A.1.1.22
TC HRGMv2_1030_5 HRGMv2_1030_5_69 73725 74564 - 3.A.1.1.45
TC HRGMv2_1030_5 HRGMv2_1030_5_70 74564 75418 - 3.A.1.1.45
TC HRGMv2_1030_5 HRGMv2_1030_5_71 75506 76822 - 3.A.1.1.45
TF HRGMv2_1030_5 HRGMv2_1030_5_72 77129 77848 - GntR
NULL(UNKNOWN) HRGMv2_1030_5 HRGMv2_1030_5_73 77932 78051 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1030_5 HRGMv2_1030_5_74 78073 80526 + 4.A.1.1.8
Gene ID: HRGMv2_1030_5_66
Type: CAZyme
Location: 68007 - 69512 (+)
Gene ID: HRGMv2_1030_5_67
Type: CAZyme
Location: 69641 - 71908 (+)
Gene ID: HRGMv2_1030_5_68
Type: TC
Location: 72457 - 73656 (-)
Gene ID: HRGMv2_1030_5_69
Type: TC
Location: 73725 - 74564 (-)
Gene ID: HRGMv2_1030_5_70
Type: TC
Location: 74564 - 75418 (-)
Gene ID: HRGMv2_1030_5_71
Type: TC
Location: 75506 - 76822 (-)
Gene ID: HRGMv2_1030_5_72
Type: TF
Location: 77129 - 77848 (-)
Gene ID: HRGMv2_1030_5_73
Type:
Location: 77932 - 78051 (-)
Gene ID: HRGMv2_1030_5_74
Type: TC
Location: 78073 - 80526 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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