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Cluster: HRGMv2_1029_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1029_11 HRGMv2_1029_11_7 6788 7618 - 3.A.1.132.3
pfam HRGMv2_1029_11 HRGMv2_1029_11_8 7878 10757 + UvrA_DNA-bind | UvrA_inter
pfam HRGMv2_1029_11 HRGMv2_1029_11_9 10892 11392 + tRNA_edit
TC HRGMv2_1029_11 HRGMv2_1029_11_10 11396 13699 + 2.A.66.4.4
pfam HRGMv2_1029_11 HRGMv2_1029_11_11 13706 15646 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1029_11 HRGMv2_1029_11_12 16012 17625 + 3.A.1.5.27
TC HRGMv2_1029_11 HRGMv2_1029_11_13 17781 18737 + 3.A.1.5.38
TC HRGMv2_1029_11 HRGMv2_1029_11_14 18741 20756 + 3.A.1.5.25
TC HRGMv2_1029_11 HRGMv2_1029_11_15 20757 21584 + 3.A.1.5.27
CAZyme HRGMv2_1029_11 HRGMv2_1029_11_16 21716 22642 + CE7
Gene ID: HRGMv2_1029_11_7
Type: TC
Location: 6788 - 7618 (-)
Gene ID: HRGMv2_1029_11_8
Type: pfam
Location: 7878 - 10757 (+)
Gene ID: HRGMv2_1029_11_9
Type: pfam
Location: 10892 - 11392 (+)
Gene ID: HRGMv2_1029_11_10
Type: TC
Location: 11396 - 13699 (+)
Gene ID: HRGMv2_1029_11_11
Type: pfam
Location: 13706 - 15646 (+)
Gene ID: HRGMv2_1029_11_12
Type: TC
Location: 16012 - 17625 (+)
Gene ID: HRGMv2_1029_11_13
Type: TC
Location: 17781 - 18737 (+)
Gene ID: HRGMv2_1029_11_14
Type: TC
Location: 18741 - 20756 (+)
Gene ID: HRGMv2_1029_11_15
Type: TC
Location: 20757 - 21584 (+)
Gene ID: HRGMv2_1029_11_16
Type: CAZyme
Location: 21716 - 22642 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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