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Cluster: HRGMv2_1029_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1029_18 HRGMv2_1029_18_6 5496 6917 - GH1
TC HRGMv2_1029_18 HRGMv2_1029_18_7 6993 8747 - 4.A.3.1.1
TF HRGMv2_1029_18 HRGMv2_1029_18_8 9023 10033 + LacI
CAZyme HRGMv2_1029_18 HRGMv2_1029_18_9 10478 11917 - GH1
TC HRGMv2_1029_18 HRGMv2_1029_18_10 11984 13753 - 4.A.3.1.1
TF HRGMv2_1029_18 HRGMv2_1029_18_11 14109 15113 + LacI
TC HRGMv2_1029_18 HRGMv2_1029_18_12 15328 15666 + 4.A.3.1.2
Gene ID: HRGMv2_1029_18_6
Type: CAZyme
Location: 5496 - 6917 (-)
Gene ID: HRGMv2_1029_18_7
Type: TC
Location: 6993 - 8747 (-)
Gene ID: HRGMv2_1029_18_8
Type: TF
Location: 9023 - 10033 (+)
Gene ID: HRGMv2_1029_18_9
Type: CAZyme
Location: 10478 - 11917 (-)
Gene ID: HRGMv2_1029_18_10
Type: TC
Location: 11984 - 13753 (-)
Gene ID: HRGMv2_1029_18_11
Type: TF
Location: 14109 - 15113 (+)
Gene ID: HRGMv2_1029_18_12
Type: TC
Location: 15328 - 15666 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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