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Cluster: HRGMv2_1027_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1027_7 HRGMv2_1027_7_6 6147 7523 - 3.A.1.17.10
NULL(UNKNOWN) HRGMv2_1027_7 HRGMv2_1027_7_7 7527 8585 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1027_7 HRGMv2_1027_7_8 8588 10399 - 3.D.1.5.1
STP HRGMv2_1027_7 HRGMv2_1027_7_9 10393 12225 - Pyr_redox_2
CAZyme HRGMv2_1027_7 HRGMv2_1027_7_10 12482 13864 - GH4
TC HRGMv2_1027_7 HRGMv2_1027_7_11 13868 15484 - 4.A.1.1.3
pfam HRGMv2_1027_7 HRGMv2_1027_7_12 15584 16450 - PRD | PRD | CAT_RBD
TC HRGMv2_1027_7 HRGMv2_1027_7_13 16457 16969 - 4.A.1.2.2
STP HRGMv2_1027_7 HRGMv2_1027_7_14 17312 17554 - Fer4 | Fer4
NULL(UNKNOWN) HRGMv2_1027_7 HRGMv2_1027_7_15 17714 17902 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1027_7 HRGMv2_1027_7_16 18730 20985 - 1.I.1.1.3
TC HRGMv2_1027_7 HRGMv2_1027_7_17 21389 23728 + 3.A.3.5.15
Gene ID: HRGMv2_1027_7_6
Type: TC
Location: 6147 - 7523 (-)
Gene ID: HRGMv2_1027_7_7
Type:
Location: 7527 - 8585 (-)
Gene ID: HRGMv2_1027_7_8
Type: TC
Location: 8588 - 10399 (-)
Gene ID: HRGMv2_1027_7_9
Type: STP
Location: 10393 - 12225 (-)
Gene ID: HRGMv2_1027_7_10
Type: CAZyme
Location: 12482 - 13864 (-)
Gene ID: HRGMv2_1027_7_11
Type: TC
Location: 13868 - 15484 (-)
Gene ID: HRGMv2_1027_7_12
Type: pfam
Location: 15584 - 16450 (-)
Gene ID: HRGMv2_1027_7_13
Type: TC
Location: 16457 - 16969 (-)
Gene ID: HRGMv2_1027_7_14
Type: STP
Location: 17312 - 17554 (-)
Gene ID: HRGMv2_1027_7_15
Type:
Location: 17714 - 17902 (+)
Gene ID: HRGMv2_1027_7_16
Type: TC
Location: 18730 - 20985 (-)
Gene ID: HRGMv2_1027_7_17
Type: TC
Location: 21389 - 23728 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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