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Cluster: HRGMv2_1005_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1005_12 HRGMv2_1005_12_10 13583 15265 + 2.A.66.4.4
pfam HRGMv2_1005_12 HRGMv2_1005_12_11 15272 17212 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1005_12 HRGMv2_1005_12_12 17577 19190 + 3.A.1.5.27
TC HRGMv2_1005_12 HRGMv2_1005_12_13 19348 20304 + 3.A.1.5.38
TC HRGMv2_1005_12 HRGMv2_1005_12_14 20308 22323 + 3.A.1.5.25
TC HRGMv2_1005_12 HRGMv2_1005_12_15 22324 23151 + 3.A.1.5.27
CAZyme HRGMv2_1005_12 HRGMv2_1005_12_16 23283 24209 + CE7
Gene ID: HRGMv2_1005_12_10
Type: TC
Location: 13583 - 15265 (+)
Gene ID: HRGMv2_1005_12_11
Type: pfam
Location: 15272 - 17212 (+)
Gene ID: HRGMv2_1005_12_12
Type: TC
Location: 17577 - 19190 (+)
Gene ID: HRGMv2_1005_12_13
Type: TC
Location: 19348 - 20304 (+)
Gene ID: HRGMv2_1005_12_14
Type: TC
Location: 20308 - 22323 (+)
Gene ID: HRGMv2_1005_12_15
Type: TC
Location: 22324 - 23151 (+)
Gene ID: HRGMv2_1005_12_16
Type: CAZyme
Location: 23283 - 24209 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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