dbCAN Logo

Cluster: HRGMv2_1005_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1005_63 HRGMv2_1005_63_1 581 1024 + 4.A.6.1.16
pfam HRGMv2_1005_63 HRGMv2_1005_63_2 1024 1305 + YajC
TC HRGMv2_1005_63 HRGMv2_1005_63_3 1342 1824 + 4.A.6.1.4
TC HRGMv2_1005_63 HRGMv2_1005_63_4 1915 2715 + 4.A.6.1.4
TC HRGMv2_1005_63 HRGMv2_1005_63_5 2705 3787 + 4.A.6.1.4
TF HRGMv2_1005_63 HRGMv2_1005_63_6 3972 4703 + GntR
STP HRGMv2_1005_63 HRGMv2_1005_63_7 4818 5984 + SIS | SIS
CAZyme HRGMv2_1005_63 HRGMv2_1005_63_8 6104 7273 + CE9
Gene ID: HRGMv2_1005_63_1
Type: TC
Location: 581 - 1024 (+)
Gene ID: HRGMv2_1005_63_2
Type: pfam
Location: 1024 - 1305 (+)
Gene ID: HRGMv2_1005_63_3
Type: TC
Location: 1342 - 1824 (+)
Gene ID: HRGMv2_1005_63_4
Type: TC
Location: 1915 - 2715 (+)
Gene ID: HRGMv2_1005_63_5
Type: TC
Location: 2705 - 3787 (+)
Gene ID: HRGMv2_1005_63_6
Type: TF
Location: 3972 - 4703 (+)
Gene ID: HRGMv2_1005_63_7
Type: STP
Location: 4818 - 5984 (+)
Gene ID: HRGMv2_1005_63_8
Type: CAZyme
Location: 6104 - 7273 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List