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Cluster: HRGMv2_0990_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0990_66 HRGMv2_0990_66_2 377 1546 - CE9
STP HRGMv2_0990_66 HRGMv2_0990_66_3 1664 2830 - SIS | SIS
TF HRGMv2_0990_66 HRGMv2_0990_66_4 2945 3676 - GntR
TC HRGMv2_0990_66 HRGMv2_0990_66_5 3862 4944 - 4.A.6.1.4
TC HRGMv2_0990_66 HRGMv2_0990_66_6 4934 5734 - 4.A.6.1.4
TC HRGMv2_0990_66 HRGMv2_0990_66_7 5825 6307 - 4.A.6.1.4
pfam HRGMv2_0990_66 HRGMv2_0990_66_8 6344 6625 - YajC
TC HRGMv2_0990_66 HRGMv2_0990_66_9 6625 7068 - 4.A.6.1.16
Gene ID: HRGMv2_0990_66_2
Type: CAZyme
Location: 377 - 1546 (-)
Gene ID: HRGMv2_0990_66_3
Type: STP
Location: 1664 - 2830 (-)
Gene ID: HRGMv2_0990_66_4
Type: TF
Location: 2945 - 3676 (-)
Gene ID: HRGMv2_0990_66_5
Type: TC
Location: 3862 - 4944 (-)
Gene ID: HRGMv2_0990_66_6
Type: TC
Location: 4934 - 5734 (-)
Gene ID: HRGMv2_0990_66_7
Type: TC
Location: 5825 - 6307 (-)
Gene ID: HRGMv2_0990_66_8
Type: pfam
Location: 6344 - 6625 (-)
Gene ID: HRGMv2_0990_66_9
Type: TC
Location: 6625 - 7068 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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