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Cluster: HRGMv2_0959_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0959_6 HRGMv2_0959_6_12 11420 12796 - 3.A.1.17.10
NULL(UNKNOWN) HRGMv2_0959_6 HRGMv2_0959_6_13 12800 13855 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0959_6 HRGMv2_0959_6_14 13858 15669 - 3.D.1.5.1
STP HRGMv2_0959_6 HRGMv2_0959_6_15 15663 17495 - Pyr_redox_2
CAZyme HRGMv2_0959_6 HRGMv2_0959_6_16 17753 19135 - GH4
TC HRGMv2_0959_6 HRGMv2_0959_6_17 19139 20755 - 4.A.1.1.3
pfam HRGMv2_0959_6 HRGMv2_0959_6_18 20855 21721 - PRD | PRD | CAT_RBD
TC HRGMv2_0959_6 HRGMv2_0959_6_19 21728 22240 - 4.A.1.2.5
STP HRGMv2_0959_6 HRGMv2_0959_6_20 22521 23282 - Fer4
TC HRGMv2_0959_6 HRGMv2_0959_6_21 23904 26153 - 1.I.1.1.3
Gene ID: HRGMv2_0959_6_12
Type: TC
Location: 11420 - 12796 (-)
Gene ID: HRGMv2_0959_6_13
Type:
Location: 12800 - 13855 (-)
Gene ID: HRGMv2_0959_6_14
Type: TC
Location: 13858 - 15669 (-)
Gene ID: HRGMv2_0959_6_15
Type: STP
Location: 15663 - 17495 (-)
Gene ID: HRGMv2_0959_6_16
Type: CAZyme
Location: 17753 - 19135 (-)
Gene ID: HRGMv2_0959_6_17
Type: TC
Location: 19139 - 20755 (-)
Gene ID: HRGMv2_0959_6_18
Type: pfam
Location: 20855 - 21721 (-)
Gene ID: HRGMv2_0959_6_19
Type: TC
Location: 21728 - 22240 (-)
Gene ID: HRGMv2_0959_6_20
Type: STP
Location: 22521 - 23282 (-)
Gene ID: HRGMv2_0959_6_21
Type: TC
Location: 23904 - 26153 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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