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PROTEIN: HRGMv2_0959_6_13

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Protein File & Metadata
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Source:
HRGMv2_0959_6_13.pdb
Genome ID:
HRGMv2_0959
Protein ID:
HRGMv2_0959_6_13

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Detailed structural information will appear here after analysis...

Protein Sequence 
MRAFDVEMSR   RGFASAFAAG   ALSLALAGCG   GGAAGAGSAA   GSVATDGAGA   AAEPVEVHVA 60
SLKGPTSIGL   VQFMDQAADG   ETDNEFDFAI   NTAADEIVPK   VIQGDIDIAL   VPANVASVLY 120
NKTEGAVQVI   DINTLGVLNV   VTGDANVASF   GDLAGHTVYM   TGKGATPEYV   MNYLLERAGL 180
TGQVTLEFKS   EPTEVLSALL   ADPSAVGVLP   EPFKTAAIAK   SEGKLSAPVS   LTDVWDELAG 240
GTGSRLLTGV   TVVRRAFAEE   HPEAVAEFLS   CHAASVKAVN   AAPADWAQAV   VDAGIVDNAK 300
IAEKAIPGCM   LVCQTGKDMK   AALSGYLQVL   SDADASAVGG   KLPADDFYYM   E 351
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q5F6W2-F1-model_v4 53 350 28 325 0.7455 0.8596
AF-Q9I0P2-F1-model_v4 50 351 19 306 0.7089 0.8362
AF-A0A0H3GZA9-F1-model_v4 52 351 25 310 0.7087 0.8432
AF-A0A0H3GP99-F1-model_v4 45 351 17 318 0.7081 0.8096
AF-A0A0D2GYL1-F1-model_v4 54 351 1 295 0.7039 0.8049
AF-A0A0H3GR32-F1-model_v4 51 351 46 344 0.6886 0.8145
AF-U7PRE8-F1-model_v4 51 351 14 321 0.6886 0.7928
AF-U7Q5Y8-F1-model_v4 49 351 2 313 0.6868 0.7886
AF-U7PXF6-F1-model_v4 54 351 1 294 0.6832 0.8069
AF-Q9I0N8-F1-model_v4 53 351 25 310 0.681 0.8045
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-L0RFS4-F1-model_v4 GH23 35 304 4 451 0.434 0.636
A0A975KCS4 GH23 41 302 34 339 0.4293 0.6449
AF-C6BRT1-F1-model_v4 GH23 39 304 30 474 0.4263 0.6393
AF-A0A0K6BW89-F1-model_v4 GH23 51 301 37 443 0.4255 0.6562
AF-A0A0P0GMK8-F1-model_v4 GH23 52 301 38 443 0.4237 0.6557
AF-F9Z9C7-F1-model_v4 GH23 52 300 37 282 0.414 0.6474
AF-B2RKI6-F1-model_v4 GH23 34 302 67 387 0.414 0.6302
AF-A0A6I6K4Y9-F1-model_v4 GH23 52 299 48 299 0.4082 0.6411
AF-Q2SK06-F1-model_v4 GH23 52 304 46 466 0.3959 0.6253
AF-A0A3T0VQB1-F1-model_v4 GH23 52 304 46 466 0.395 0.6247
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
C8W6R6 CBM50 47 315 50 335 0.5257 0.6756
A0A975KCS4 GH23 41 302 34 339 0.4293 0.6449
C6BRT1 GH23 39 304 30 474 0.4263 0.6393
E1YCM4 GH23 28 304 11 450 0.4209 0.5989
A8ZWR8 GH23 27 304 10 450 0.4133 0.5813
A0A6I6K4Y9 GH23 52 299 48 299 0.4082 0.6411
A0A1Y3Y3U2 GH23 52 299 37 282 0.4071 0.6373
F3Z2E8 GH23 55 304 43 459 0.4069 0.6391
A0A6C0GKB0 GH23 18 298 47 306 0.403 0.6143
A0A0S2HZI4 GH23 26 299 32 305 0.4 0.5832
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3hn0-assembly1.cif.gz_A 54 351 1 279 0.7889 0.8952
2x26-assembly2.cif.gz_B 53 350 1 286 0.7337 0.8358
2x26-assembly1.cif.gz_A 53 351 1 287 0.7156 0.8344
3un6-assembly1.cif.gz_A 54 351 1 283 0.6832 0.7881
3uif-assembly1.cif.gz_A 53 351 3 307 0.6773 0.7874
3ksx-assembly1.cif.gz_A 52 351 1 289 0.6665 0.7551
7ahr-assembly1.cif.gz_A 54 351 5 280 0.6616 0.7726
6st1-assembly2.cif.gz_B 56 351 1 295 0.6546 0.7382
7an6-assembly1.cif.gz_B 54 351 5 282 0.6542 0.7598
7an9-assembly1.cif.gz_B 55 351 1 277 0.6536 0.7536
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-C0SP84-F1-model_v4 52 351 28 325 0.6923 0.8095
AF-A9WGD2-F1-model_v4 52 351 42 344 0.6766 0.804
AF-Q9KXN1-F1-model_v4 53 350 1 282 0.6732 0.7701
AF-P75853-F1-model_v4 46 351 16 311 0.6628 0.767
AF-Q5SI12-F1-model_v4 55 349 1 272 0.6456 0.7501
AF-Q8FUN4-F1-model_v4 50 351 19 317 0.6437 0.7393
AF-Q5ZV75-F1-model_v4 53 351 5 297 0.6381 0.7445
AF-Q576E1-F1-model_v4 50 351 19 317 0.6377 0.733
AF-Q47537-F1-model_v4 53 351 20 317 0.6365 0.7352
AF-Q2YJB6-F1-model_v4 50 351 19 317 0.6354 0.7306
Download Full SwissProt Results