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Cluster: HRGMv2_0911_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0911_31 HRGMv2_0911_31_5 7088 9538 - 4.A.1.1.8
NULL(UNKNOWN) HRGMv2_0911_31 HRGMv2_0911_31_6 9560 9679 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_0911_31 HRGMv2_0911_31_7 9763 10482 + GntR
TC HRGMv2_0911_31 HRGMv2_0911_31_8 10789 12105 + 3.A.1.1.45
TC HRGMv2_0911_31 HRGMv2_0911_31_9 12193 13047 + 3.A.1.1.45
TC HRGMv2_0911_31 HRGMv2_0911_31_10 13047 13886 + 3.A.1.1.45
TC HRGMv2_0911_31 HRGMv2_0911_31_11 13955 15154 + 3.A.1.1.22
CAZyme HRGMv2_0911_31 HRGMv2_0911_31_12 15611 17878 - GT35
CAZyme HRGMv2_0911_31 HRGMv2_0911_31_13 18007 19512 - GH77
Gene ID: HRGMv2_0911_31_5
Type: TC
Location: 7088 - 9538 (-)
Gene ID: HRGMv2_0911_31_6
Type:
Location: 9560 - 9679 (+)
Gene ID: HRGMv2_0911_31_7
Type: TF
Location: 9763 - 10482 (+)
Gene ID: HRGMv2_0911_31_8
Type: TC
Location: 10789 - 12105 (+)
Gene ID: HRGMv2_0911_31_9
Type: TC
Location: 12193 - 13047 (+)
Gene ID: HRGMv2_0911_31_10
Type: TC
Location: 13047 - 13886 (+)
Gene ID: HRGMv2_0911_31_11
Type: TC
Location: 13955 - 15154 (+)
Gene ID: HRGMv2_0911_31_12
Type: CAZyme
Location: 15611 - 17878 (-)
Gene ID: HRGMv2_0911_31_13
Type: CAZyme
Location: 18007 - 19512 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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