dbCAN Logo

Cluster: HRGMv2_0909_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0909_16 HRGMv2_0909_16_10 13586 15268 + 2.A.66.4.4
pfam HRGMv2_0909_16 HRGMv2_0909_16_11 15275 17215 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0909_16 HRGMv2_0909_16_12 17580 19193 + 3.A.1.5.27
TC HRGMv2_0909_16 HRGMv2_0909_16_13 19351 20307 + 3.A.1.5.38
TC HRGMv2_0909_16 HRGMv2_0909_16_14 20311 22326 + 3.A.1.5.25
TC HRGMv2_0909_16 HRGMv2_0909_16_15 22327 23154 + 3.A.1.5.27
CAZyme HRGMv2_0909_16 HRGMv2_0909_16_16 23286 24212 + CE7
Gene ID: HRGMv2_0909_16_10
Type: TC
Location: 13586 - 15268 (+)
Gene ID: HRGMv2_0909_16_11
Type: pfam
Location: 15275 - 17215 (+)
Gene ID: HRGMv2_0909_16_12
Type: TC
Location: 17580 - 19193 (+)
Gene ID: HRGMv2_0909_16_13
Type: TC
Location: 19351 - 20307 (+)
Gene ID: HRGMv2_0909_16_14
Type: TC
Location: 20311 - 22326 (+)
Gene ID: HRGMv2_0909_16_15
Type: TC
Location: 22327 - 23154 (+)
Gene ID: HRGMv2_0909_16_16
Type: CAZyme
Location: 23286 - 24212 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List