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Cluster: HRGMv2_0909_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0909_10 HRGMv2_0909_10_1 3 665 - CE9
STP HRGMv2_0909_10 HRGMv2_0909_10_2 784 1950 - SIS | SIS
TF HRGMv2_0909_10 HRGMv2_0909_10_3 2065 2796 - GntR
TC HRGMv2_0909_10 HRGMv2_0909_10_4 2982 4064 - 4.A.6.1.4
TC HRGMv2_0909_10 HRGMv2_0909_10_5 4054 4854 - 4.A.6.1.4
TC HRGMv2_0909_10 HRGMv2_0909_10_6 4945 5427 - 4.A.6.1.4
pfam HRGMv2_0909_10 HRGMv2_0909_10_7 5464 5745 - YajC
TC HRGMv2_0909_10 HRGMv2_0909_10_8 5745 6188 - 4.A.6.1.16
Gene ID: HRGMv2_0909_10_1
Type: CAZyme
Location: 3 - 665 (-)
Gene ID: HRGMv2_0909_10_2
Type: STP
Location: 784 - 1950 (-)
Gene ID: HRGMv2_0909_10_3
Type: TF
Location: 2065 - 2796 (-)
Gene ID: HRGMv2_0909_10_4
Type: TC
Location: 2982 - 4064 (-)
Gene ID: HRGMv2_0909_10_5
Type: TC
Location: 4054 - 4854 (-)
Gene ID: HRGMv2_0909_10_6
Type: TC
Location: 4945 - 5427 (-)
Gene ID: HRGMv2_0909_10_7
Type: pfam
Location: 5464 - 5745 (-)
Gene ID: HRGMv2_0909_10_8
Type: TC
Location: 5745 - 6188 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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