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Cluster: HRGMv2_0904_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0904_16 HRGMv2_0904_16_17 16557 17483 - CE7
TC HRGMv2_0904_16 HRGMv2_0904_16_18 17615 18442 - 3.A.1.5.27
TC HRGMv2_0904_16 HRGMv2_0904_16_19 18443 20458 - 3.A.1.5.25
TC HRGMv2_0904_16 HRGMv2_0904_16_20 20462 21418 - 3.A.1.5.38
TC HRGMv2_0904_16 HRGMv2_0904_16_21 21576 23189 - 3.A.1.5.27
pfam HRGMv2_0904_16 HRGMv2_0904_16_22 23555 25495 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0904_16 HRGMv2_0904_16_23 25502 27184 - 2.A.66.4.4
Gene ID: HRGMv2_0904_16_17
Type: CAZyme
Location: 16557 - 17483 (-)
Gene ID: HRGMv2_0904_16_18
Type: TC
Location: 17615 - 18442 (-)
Gene ID: HRGMv2_0904_16_19
Type: TC
Location: 18443 - 20458 (-)
Gene ID: HRGMv2_0904_16_20
Type: TC
Location: 20462 - 21418 (-)
Gene ID: HRGMv2_0904_16_21
Type: TC
Location: 21576 - 23189 (-)
Gene ID: HRGMv2_0904_16_22
Type: pfam
Location: 23555 - 25495 (-)
Gene ID: HRGMv2_0904_16_23
Type: TC
Location: 25502 - 27184 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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