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Cluster: HRGMv2_0903_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0903_7 HRGMv2_0903_7_19 21791 22717 - CE7
TC HRGMv2_0903_7 HRGMv2_0903_7_20 22849 23676 - 3.A.1.5.27
TC HRGMv2_0903_7 HRGMv2_0903_7_21 23677 25692 - 3.A.1.5.25
TC HRGMv2_0903_7 HRGMv2_0903_7_22 25696 26652 - 3.A.1.5.38
TC HRGMv2_0903_7 HRGMv2_0903_7_23 26810 28423 - 3.A.1.5.27
pfam HRGMv2_0903_7 HRGMv2_0903_7_24 28789 30729 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0903_7 HRGMv2_0903_7_25 30736 33039 - 2.A.66.4.4
Gene ID: HRGMv2_0903_7_19
Type: CAZyme
Location: 21791 - 22717 (-)
Gene ID: HRGMv2_0903_7_20
Type: TC
Location: 22849 - 23676 (-)
Gene ID: HRGMv2_0903_7_21
Type: TC
Location: 23677 - 25692 (-)
Gene ID: HRGMv2_0903_7_22
Type: TC
Location: 25696 - 26652 (-)
Gene ID: HRGMv2_0903_7_23
Type: TC
Location: 26810 - 28423 (-)
Gene ID: HRGMv2_0903_7_24
Type: pfam
Location: 28789 - 30729 (-)
Gene ID: HRGMv2_0903_7_25
Type: TC
Location: 30736 - 33039 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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