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Cluster: HRGMv2_0903_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0903_4 HRGMv2_0903_4_250 289203 290561 - 2.A.33.1.1
pfam HRGMv2_0903_4 HRGMv2_0903_4_251 290829 291752 - DHH | DHHA2
STP HRGMv2_0903_4 HRGMv2_0903_4_252 291919 292872 - Glucokinase
TC HRGMv2_0903_4 HRGMv2_0903_4_253 293114 293446 - 4.A.3.2.3
TC HRGMv2_0903_4 HRGMv2_0903_4_254 293456 293758 - 4.A.3.2.9
TC HRGMv2_0903_4 HRGMv2_0903_4_255 293912 295264 - 4.A.3.2.2
CAZyme HRGMv2_0903_4 HRGMv2_0903_4_256 295385 296785 - GH1
Gene ID: HRGMv2_0903_4_250
Type: TC
Location: 289203 - 290561 (-)
Gene ID: HRGMv2_0903_4_251
Type: pfam
Location: 290829 - 291752 (-)
Gene ID: HRGMv2_0903_4_252
Type: STP
Location: 291919 - 292872 (-)
Gene ID: HRGMv2_0903_4_253
Type: TC
Location: 293114 - 293446 (-)
Gene ID: HRGMv2_0903_4_254
Type: TC
Location: 293456 - 293758 (-)
Gene ID: HRGMv2_0903_4_255
Type: TC
Location: 293912 - 295264 (-)
Gene ID: HRGMv2_0903_4_256
Type: CAZyme
Location: 295385 - 296785 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0903_4_254 vegan > omnivore 1.03512 0.00701

🧭 Explore Read Mapping of CGC

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