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Cluster: HRGMv2_0903_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0903_4 HRGMv2_0903_4_179 213536 213874 - 4.A.3.1.2
TF HRGMv2_0903_4 HRGMv2_0903_4_180 214089 215093 - LacI
TC HRGMv2_0903_4 HRGMv2_0903_4_181 215451 217217 + 4.A.3.1.1
CAZyme HRGMv2_0903_4 HRGMv2_0903_4_182 217284 218723 + GH1
TF HRGMv2_0903_4 HRGMv2_0903_4_183 218991 220028 - LacI
CAZyme HRGMv2_0903_4 HRGMv2_0903_4_184 220370 221812 + GH1
TC HRGMv2_0903_4 HRGMv2_0903_4_185 221989 223749 + 4.A.3.1.1
TF HRGMv2_0903_4 HRGMv2_0903_4_186 224003 225013 - LacI
TC HRGMv2_0903_4 HRGMv2_0903_4_187 225289 227067 + 4.A.3.1.1
CAZyme HRGMv2_0903_4 HRGMv2_0903_4_188 227143 228564 + GH1
pfam HRGMv2_0903_4 HRGMv2_0903_4_189 228932 230164 + Fic
STP HRGMv2_0903_4 HRGMv2_0903_4_190 230213 230542 - DeoRC
TC HRGMv2_0903_4 HRGMv2_0903_4_191 230705 232399 - 4.A.3.1.1
Gene ID: HRGMv2_0903_4_179
Type: TC
Location: 213536 - 213874 (-)
Gene ID: HRGMv2_0903_4_180
Type: TF
Location: 214089 - 215093 (-)
Gene ID: HRGMv2_0903_4_181
Type: TC
Location: 215451 - 217217 (+)
Gene ID: HRGMv2_0903_4_182
Type: CAZyme
Location: 217284 - 218723 (+)
Gene ID: HRGMv2_0903_4_183
Type: TF
Location: 218991 - 220028 (-)
Gene ID: HRGMv2_0903_4_184
Type: CAZyme
Location: 220370 - 221812 (+)
Gene ID: HRGMv2_0903_4_185
Type: TC
Location: 221989 - 223749 (+)
Gene ID: HRGMv2_0903_4_186
Type: TF
Location: 224003 - 225013 (-)
Gene ID: HRGMv2_0903_4_187
Type: TC
Location: 225289 - 227067 (+)
Gene ID: HRGMv2_0903_4_188
Type: CAZyme
Location: 227143 - 228564 (+)
Gene ID: HRGMv2_0903_4_189
Type: pfam
Location: 228932 - 230164 (+)
Gene ID: HRGMv2_0903_4_190
Type: STP
Location: 230213 - 230542 (-)
Gene ID: HRGMv2_0903_4_191
Type: TC
Location: 230705 - 232399 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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