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Cluster: HRGMv2_0903_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0903_17 HRGMv2_0903_17_13 12140 13645 + GH77
CAZyme HRGMv2_0903_17 HRGMv2_0903_17_14 13774 16041 + GT35
TC HRGMv2_0903_17 HRGMv2_0903_17_15 16507 17706 - 3.A.1.1.22
TC HRGMv2_0903_17 HRGMv2_0903_17_16 17775 18614 - 3.A.1.1.45
TC HRGMv2_0903_17 HRGMv2_0903_17_17 18614 19468 - 3.A.1.1.45
TC HRGMv2_0903_17 HRGMv2_0903_17_18 19557 20873 - 3.A.1.1.45
TF HRGMv2_0903_17 HRGMv2_0903_17_19 21180 21899 - GntR
TC HRGMv2_0903_17 HRGMv2_0903_17_20 22127 24577 + 4.A.1.1.8
Gene ID: HRGMv2_0903_17_13
Type: CAZyme
Location: 12140 - 13645 (+)
Gene ID: HRGMv2_0903_17_14
Type: CAZyme
Location: 13774 - 16041 (+)
Gene ID: HRGMv2_0903_17_15
Type: TC
Location: 16507 - 17706 (-)
Gene ID: HRGMv2_0903_17_16
Type: TC
Location: 17775 - 18614 (-)
Gene ID: HRGMv2_0903_17_17
Type: TC
Location: 18614 - 19468 (-)
Gene ID: HRGMv2_0903_17_18
Type: TC
Location: 19557 - 20873 (-)
Gene ID: HRGMv2_0903_17_19
Type: TF
Location: 21180 - 21899 (-)
Gene ID: HRGMv2_0903_17_20
Type: TC
Location: 22127 - 24577 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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