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Cluster: HRGMv2_0903_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0903_11 HRGMv2_0903_11_116 119941 122280 - 3.A.3.5.15
TC HRGMv2_0903_11 HRGMv2_0903_11_117 122851 125094 + 1.I.1.1.3
TC HRGMv2_0903_11 HRGMv2_0903_11_118 125556 126068 + 4.A.1.2.2
pfam HRGMv2_0903_11 HRGMv2_0903_11_119 126075 126941 + PRD | PRD | CAT_RBD
TC HRGMv2_0903_11 HRGMv2_0903_11_120 127041 128657 + 4.A.1.1.3
CAZyme HRGMv2_0903_11 HRGMv2_0903_11_121 128661 130043 + GH4
Gene ID: HRGMv2_0903_11_116
Type: TC
Location: 119941 - 122280 (-)
Gene ID: HRGMv2_0903_11_117
Type: TC
Location: 122851 - 125094 (+)
Gene ID: HRGMv2_0903_11_118
Type: TC
Location: 125556 - 126068 (+)
Gene ID: HRGMv2_0903_11_119
Type: pfam
Location: 126075 - 126941 (+)
Gene ID: HRGMv2_0903_11_120
Type: TC
Location: 127041 - 128657 (+)
Gene ID: HRGMv2_0903_11_121
Type: CAZyme
Location: 128661 - 130043 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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