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Cluster: HRGMv2_0869_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0869_15 HRGMv2_0869_15_38 44226 44564 - 4.A.3.1.2
TF HRGMv2_0869_15 HRGMv2_0869_15_39 44779 45783 - LacI
TC HRGMv2_0869_15 HRGMv2_0869_15_40 46141 47916 + 4.A.3.1.1
CAZyme HRGMv2_0869_15 HRGMv2_0869_15_41 47983 49422 + GH1
TF HRGMv2_0869_15 HRGMv2_0869_15_42 49690 50727 - LacI
CAZyme HRGMv2_0869_15 HRGMv2_0869_15_43 51069 52511 + GH1
TC HRGMv2_0869_15 HRGMv2_0869_15_44 52688 54448 + 4.A.3.1.1
TF HRGMv2_0869_15 HRGMv2_0869_15_45 54706 55716 - LacI
TC HRGMv2_0869_15 HRGMv2_0869_15_46 55992 57770 + 4.A.3.1.1
CAZyme HRGMv2_0869_15 HRGMv2_0869_15_47 57847 59268 + GH1
TF HRGMv2_0869_15 HRGMv2_0869_15_48 59465 60229 - HTH_DeoR
sulfatase HRGMv2_0869_15 HRGMv2_0869_15_49 60436 61488 + S1_4
TC HRGMv2_0869_15 HRGMv2_0869_15_50 61815 62297 - 4.A.6.1.5
Gene ID: HRGMv2_0869_15_38
Type: TC
Location: 44226 - 44564 (-)
Gene ID: HRGMv2_0869_15_39
Type: TF
Location: 44779 - 45783 (-)
Gene ID: HRGMv2_0869_15_40
Type: TC
Location: 46141 - 47916 (+)
Gene ID: HRGMv2_0869_15_41
Type: CAZyme
Location: 47983 - 49422 (+)
Gene ID: HRGMv2_0869_15_42
Type: TF
Location: 49690 - 50727 (-)
Gene ID: HRGMv2_0869_15_43
Type: CAZyme
Location: 51069 - 52511 (+)
Gene ID: HRGMv2_0869_15_44
Type: TC
Location: 52688 - 54448 (+)
Gene ID: HRGMv2_0869_15_45
Type: TF
Location: 54706 - 55716 (-)
Gene ID: HRGMv2_0869_15_46
Type: TC
Location: 55992 - 57770 (+)
Gene ID: HRGMv2_0869_15_47
Type: CAZyme
Location: 57847 - 59268 (+)
Gene ID: HRGMv2_0869_15_48
Type: TF
Location: 59465 - 60229 (-)
Gene ID: HRGMv2_0869_15_49
Type: sulfatase
Location: 60436 - 61488 (+)
Gene ID: HRGMv2_0869_15_50
Type: TC
Location: 61815 - 62297 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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