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Cluster: HRGMv2_0869_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0869_9 HRGMv2_0869_9_105 114485 115411 - CE7
TC HRGMv2_0869_9 HRGMv2_0869_9_106 115543 116370 - 3.A.1.5.27
TC HRGMv2_0869_9 HRGMv2_0869_9_107 116371 118386 - 3.A.1.5.25
TC HRGMv2_0869_9 HRGMv2_0869_9_108 118390 119346 - 3.A.1.5.38
TC HRGMv2_0869_9 HRGMv2_0869_9_109 119504 121117 - 3.A.1.5.27
pfam HRGMv2_0869_9 HRGMv2_0869_9_110 121483 123423 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0869_9 HRGMv2_0869_9_111 123430 125733 - 2.A.66.4.4
Gene ID: HRGMv2_0869_9_105
Type: CAZyme
Location: 114485 - 115411 (-)
Gene ID: HRGMv2_0869_9_106
Type: TC
Location: 115543 - 116370 (-)
Gene ID: HRGMv2_0869_9_107
Type: TC
Location: 116371 - 118386 (-)
Gene ID: HRGMv2_0869_9_108
Type: TC
Location: 118390 - 119346 (-)
Gene ID: HRGMv2_0869_9_109
Type: TC
Location: 119504 - 121117 (-)
Gene ID: HRGMv2_0869_9_110
Type: pfam
Location: 121483 - 123423 (-)
Gene ID: HRGMv2_0869_9_111
Type: TC
Location: 123430 - 125733 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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