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Cluster: HRGMv2_0869_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0869_9 HRGMv2_0869_9_86 90817 92550 - GH13_30
STP HRGMv2_0869_9 HRGMv2_0869_9_87 93295 94041 - STAS
STP HRGMv2_0869_9 HRGMv2_0869_9_88 94123 96468 - GAF | SpoIIE
TC HRGMv2_0869_9 HRGMv2_0869_9_89 97212 98240 - 3.A.1.5.36
TC HRGMv2_0869_9 HRGMv2_0869_9_90 98241 99332 - 3.A.1.5.34
TC HRGMv2_0869_9 HRGMv2_0869_9_91 99335 100270 - 3.A.1.5.11
TC HRGMv2_0869_9 HRGMv2_0869_9_92 100285 101322 - 3.A.1.5.37
TC HRGMv2_0869_9 HRGMv2_0869_9_93 101479 103155 - 3.A.1.5.35
Gene ID: HRGMv2_0869_9_86
Type: CAZyme
Location: 90817 - 92550 (-)
Gene ID: HRGMv2_0869_9_87
Type: STP
Location: 93295 - 94041 (-)
Gene ID: HRGMv2_0869_9_88
Type: STP
Location: 94123 - 96468 (-)
Gene ID: HRGMv2_0869_9_89
Type: TC
Location: 97212 - 98240 (-)
Gene ID: HRGMv2_0869_9_90
Type: TC
Location: 98241 - 99332 (-)
Gene ID: HRGMv2_0869_9_91
Type: TC
Location: 99335 - 100270 (-)
Gene ID: HRGMv2_0869_9_92
Type: TC
Location: 100285 - 101322 (-)
Gene ID: HRGMv2_0869_9_93
Type: TC
Location: 101479 - 103155 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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