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Cluster: HRGMv2_0869_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0869_38 HRGMv2_0869_38_11 12992 14497 + GH77
CAZyme HRGMv2_0869_38 HRGMv2_0869_38_12 14626 16893 + GT35
TC HRGMv2_0869_38 HRGMv2_0869_38_13 17349 18548 - 3.A.1.1.22
TC HRGMv2_0869_38 HRGMv2_0869_38_14 18617 19456 - 3.A.1.1.45
TC HRGMv2_0869_38 HRGMv2_0869_38_15 19456 20310 - 3.A.1.1.45
TC HRGMv2_0869_38 HRGMv2_0869_38_16 20398 21714 - 3.A.1.1.45
TF HRGMv2_0869_38 HRGMv2_0869_38_17 22021 22740 - GntR
TC HRGMv2_0869_38 HRGMv2_0869_38_18 22968 25418 + 4.A.1.1.8
Gene ID: HRGMv2_0869_38_11
Type: CAZyme
Location: 12992 - 14497 (+)
Gene ID: HRGMv2_0869_38_12
Type: CAZyme
Location: 14626 - 16893 (+)
Gene ID: HRGMv2_0869_38_13
Type: TC
Location: 17349 - 18548 (-)
Gene ID: HRGMv2_0869_38_14
Type: TC
Location: 18617 - 19456 (-)
Gene ID: HRGMv2_0869_38_15
Type: TC
Location: 19456 - 20310 (-)
Gene ID: HRGMv2_0869_38_16
Type: TC
Location: 20398 - 21714 (-)
Gene ID: HRGMv2_0869_38_17
Type: TF
Location: 22021 - 22740 (-)
Gene ID: HRGMv2_0869_38_18
Type: TC
Location: 22968 - 25418 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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