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Cluster: HRGMv2_0869_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0869_26 HRGMv2_0869_26_2 2219 3013 - 3.A.1.34.1
TC HRGMv2_0869_26 HRGMv2_0869_26_3 3006 3929 - 3.A.1.34.1
TC HRGMv2_0869_26 HRGMv2_0869_26_4 4134 5114 - 3.A.1.34.1
NULL(UNKNOWN) HRGMv2_0869_26 HRGMv2_0869_26_5 5275 6057 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0869_26 HRGMv2_0869_26_6 6316 7719 - tRNA-synt_2 | tRNA_anti-codon
TC HRGMv2_0869_26 HRGMv2_0869_26_7 7901 8464 - 4.A.1.2.6
peptidase HRGMv2_0869_26 HRGMv2_0869_26_8 8628 9611 + S09.UPW
TC HRGMv2_0869_26 HRGMv2_0869_26_9 9796 12156 + 9.A.8.1.6
TC HRGMv2_0869_26 HRGMv2_0869_26_10 12278 13474 + 2.A.1.2.18
CAZyme HRGMv2_0869_26 HRGMv2_0869_26_11 13629 15005 + GH13_20
Gene ID: HRGMv2_0869_26_2
Type: TC
Location: 2219 - 3013 (-)
Gene ID: HRGMv2_0869_26_3
Type: TC
Location: 3006 - 3929 (-)
Gene ID: HRGMv2_0869_26_4
Type: TC
Location: 4134 - 5114 (-)
Gene ID: HRGMv2_0869_26_5
Type:
Location: 5275 - 6057 (-)
Gene ID: HRGMv2_0869_26_6
Type: pfam
Location: 6316 - 7719 (-)
Gene ID: HRGMv2_0869_26_7
Type: TC
Location: 7901 - 8464 (-)
Gene ID: HRGMv2_0869_26_8
Type: peptidase
Location: 8628 - 9611 (+)
Gene ID: HRGMv2_0869_26_9
Type: TC
Location: 9796 - 12156 (+)
Gene ID: HRGMv2_0869_26_10
Type: TC
Location: 12278 - 13474 (+)
Gene ID: HRGMv2_0869_26_11
Type: CAZyme
Location: 13629 - 15005 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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