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Cluster: HRGMv2_0867_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0867_4 HRGMv2_0867_4_92 102320 104053 - GH13_30
STP HRGMv2_0867_4 HRGMv2_0867_4_93 104798 105544 - STAS
STP HRGMv2_0867_4 HRGMv2_0867_4_94 105626 107971 - GAF | SpoIIE
TC HRGMv2_0867_4 HRGMv2_0867_4_95 108715 109743 - 3.A.1.5.36
TC HRGMv2_0867_4 HRGMv2_0867_4_96 109743 110834 - 3.A.1.5.34
TC HRGMv2_0867_4 HRGMv2_0867_4_97 110837 111772 - 3.A.1.5.11
TC HRGMv2_0867_4 HRGMv2_0867_4_98 111787 112824 - 3.A.1.5.37
TC HRGMv2_0867_4 HRGMv2_0867_4_99 112982 114658 - 3.A.1.5.35
Gene ID: HRGMv2_0867_4_92
Type: CAZyme
Location: 102320 - 104053 (-)
Gene ID: HRGMv2_0867_4_93
Type: STP
Location: 104798 - 105544 (-)
Gene ID: HRGMv2_0867_4_94
Type: STP
Location: 105626 - 107971 (-)
Gene ID: HRGMv2_0867_4_95
Type: TC
Location: 108715 - 109743 (-)
Gene ID: HRGMv2_0867_4_96
Type: TC
Location: 109743 - 110834 (-)
Gene ID: HRGMv2_0867_4_97
Type: TC
Location: 110837 - 111772 (-)
Gene ID: HRGMv2_0867_4_98
Type: TC
Location: 111787 - 112824 (-)
Gene ID: HRGMv2_0867_4_99
Type: TC
Location: 112982 - 114658 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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