Cluster: HRGMv2_0867_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0867
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0867_2 | HRGMv2_0867_2_153 | 182399 | 184726 | - | 9.A.8.1.6 |
| TC | HRGMv2_0867_2 | HRGMv2_0867_2_154 | 184850 | 185071 | - | 9.A.8.1.6 |
| STP | HRGMv2_0867_2 | HRGMv2_0867_2_155 | 185112 | 185354 | - | FeoA |
| STP | HRGMv2_0867_2 | HRGMv2_0867_2_156 | 185543 | 185791 | - | PTS-HPr |
| TC | HRGMv2_0867_2 | HRGMv2_0867_2_157 | 186213 | 187676 | - | 2.A.3.7.4 |
| NULL(UNKNOWN) | HRGMv2_0867_2 | HRGMv2_0867_2_158 | 187830 | 188285 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0867_2 | HRGMv2_0867_2_159 | 188289 | 191297 | - | GH2 |
Gene ID: HRGMv2_0867_2_153
Type: TC
Location: 182399 - 184726 (-)
Type: TC
Location: 182399 - 184726 (-)
Gene ID: HRGMv2_0867_2_154
Type: TC
Location: 184850 - 185071 (-)
Type: TC
Location: 184850 - 185071 (-)
Gene ID: HRGMv2_0867_2_155
Type: STP
Location: 185112 - 185354 (-)
Type: STP
Location: 185112 - 185354 (-)
Gene ID: HRGMv2_0867_2_156
Type: STP
Location: 185543 - 185791 (-)
Type: STP
Location: 185543 - 185791 (-)
Gene ID: HRGMv2_0867_2_157
Type: TC
Location: 186213 - 187676 (-)
Type: TC
Location: 186213 - 187676 (-)
Gene ID: HRGMv2_0867_2_158
Type:
Location: 187830 - 188285 (-)
Type:
Location: 187830 - 188285 (-)
Gene ID: HRGMv2_0867_2_159
Type: CAZyme
Location: 188289 - 191297 (-)
Type: CAZyme
Location: 188289 - 191297 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_AM
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.