Cluster: HRGMv2_0867_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0867
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0867_13 | HRGMv2_0867_13_42 | 53697 | 55103 | + | CE4 |
| STP | HRGMv2_0867_13 | HRGMv2_0867_13_43 | 55432 | 57276 | + | CBS | CBS |
| TC | HRGMv2_0867_13 | HRGMv2_0867_13_44 | 57285 | 58547 | + | 2.A.55.3.6 |
| TC | HRGMv2_0867_13 | HRGMv2_0867_13_45 | 59093 | 61309 | - | 9.B.97.5.1 |
Gene ID: HRGMv2_0867_13_42
Type: CAZyme
Location: 53697 - 55103 (+)
Type: CAZyme
Location: 53697 - 55103 (+)
Gene ID: HRGMv2_0867_13_43
Type: STP
Location: 55432 - 57276 (+)
Type: STP
Location: 55432 - 57276 (+)
Gene ID: HRGMv2_0867_13_44
Type: TC
Location: 57285 - 58547 (+)
Type: TC
Location: 57285 - 58547 (+)
Gene ID: HRGMv2_0867_13_45
Type: TC
Location: 59093 - 61309 (-)
Type: TC
Location: 59093 - 61309 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_AM
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.