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Cluster: HRGMv2_0867_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0867_12 HRGMv2_0867_12_11 15143 17611 - 4.A.1.1.8
TF HRGMv2_0867_12 HRGMv2_0867_12_12 17821 18540 + GntR
TC HRGMv2_0867_12 HRGMv2_0867_12_13 18847 20163 + 3.A.1.1.45
TC HRGMv2_0867_12 HRGMv2_0867_12_14 20251 21105 + 3.A.1.1.45
TC HRGMv2_0867_12 HRGMv2_0867_12_15 21105 21944 + 3.A.1.1.45
TC HRGMv2_0867_12 HRGMv2_0867_12_16 22013 23212 + 3.A.1.1.22
CAZyme HRGMv2_0867_12 HRGMv2_0867_12_17 23666 25933 - GT35
CAZyme HRGMv2_0867_12 HRGMv2_0867_12_18 26063 27568 - GH77
Gene ID: HRGMv2_0867_12_11
Type: TC
Location: 15143 - 17611 (-)
Gene ID: HRGMv2_0867_12_12
Type: TF
Location: 17821 - 18540 (+)
Gene ID: HRGMv2_0867_12_13
Type: TC
Location: 18847 - 20163 (+)
Gene ID: HRGMv2_0867_12_14
Type: TC
Location: 20251 - 21105 (+)
Gene ID: HRGMv2_0867_12_15
Type: TC
Location: 21105 - 21944 (+)
Gene ID: HRGMv2_0867_12_16
Type: TC
Location: 22013 - 23212 (+)
Gene ID: HRGMv2_0867_12_17
Type: CAZyme
Location: 23666 - 25933 (-)
Gene ID: HRGMv2_0867_12_18
Type: CAZyme
Location: 26063 - 27568 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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