Cluster: HRGMv2_0867_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0867
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0867_4 | HRGMv2_0867_4_111 | 125985 | 126911 | - | CE7 |
| TC | HRGMv2_0867_4 | HRGMv2_0867_4_112 | 127043 | 127870 | - | 3.A.1.5.27 |
| TC | HRGMv2_0867_4 | HRGMv2_0867_4_113 | 127871 | 129886 | - | 3.A.1.5.25 |
| TC | HRGMv2_0867_4 | HRGMv2_0867_4_114 | 129890 | 130846 | - | 3.A.1.5.38 |
| TC | HRGMv2_0867_4 | HRGMv2_0867_4_115 | 131004 | 132617 | - | 3.A.1.5.27 |
Gene ID: HRGMv2_0867_4_111
Type: CAZyme
Location: 125985 - 126911 (-)
Type: CAZyme
Location: 125985 - 126911 (-)
Gene ID: HRGMv2_0867_4_112
Type: TC
Location: 127043 - 127870 (-)
Type: TC
Location: 127043 - 127870 (-)
Gene ID: HRGMv2_0867_4_113
Type: TC
Location: 127871 - 129886 (-)
Type: TC
Location: 127871 - 129886 (-)
Gene ID: HRGMv2_0867_4_114
Type: TC
Location: 129890 - 130846 (-)
Type: TC
Location: 129890 - 130846 (-)
Gene ID: HRGMv2_0867_4_115
Type: TC
Location: 131004 - 132617 (-)
Type: TC
Location: 131004 - 132617 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella aerofaciens_AM
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.