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Cluster: HRGMv2_0861_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0861_1 HRGMv2_0861_1_145 144967 146388 - GH1
TC HRGMv2_0861_1 HRGMv2_0861_1_146 146465 148243 - 4.A.3.1.1
TF HRGMv2_0861_1 HRGMv2_0861_1_147 148520 149530 + LacI
TC HRGMv2_0861_1 HRGMv2_0861_1_148 149704 151464 - 4.A.3.1.1
CAZyme HRGMv2_0861_1 HRGMv2_0861_1_149 151640 153082 - GH1
TF HRGMv2_0861_1 HRGMv2_0861_1_150 153376 154461 + LacI
CAZyme HRGMv2_0861_1 HRGMv2_0861_1_151 154731 156170 - GH1
TC HRGMv2_0861_1 HRGMv2_0861_1_152 156237 158012 - 4.A.3.1.1
TF HRGMv2_0861_1 HRGMv2_0861_1_153 158370 159374 + LacI
TC HRGMv2_0861_1 HRGMv2_0861_1_154 159589 159927 + 4.A.3.1.2
Gene ID: HRGMv2_0861_1_145
Type: CAZyme
Location: 144967 - 146388 (-)
Gene ID: HRGMv2_0861_1_146
Type: TC
Location: 146465 - 148243 (-)
Gene ID: HRGMv2_0861_1_147
Type: TF
Location: 148520 - 149530 (+)
Gene ID: HRGMv2_0861_1_148
Type: TC
Location: 149704 - 151464 (-)
Gene ID: HRGMv2_0861_1_149
Type: CAZyme
Location: 151640 - 153082 (-)
Gene ID: HRGMv2_0861_1_150
Type: TF
Location: 153376 - 154461 (+)
Gene ID: HRGMv2_0861_1_151
Type: CAZyme
Location: 154731 - 156170 (-)
Gene ID: HRGMv2_0861_1_152
Type: TC
Location: 156237 - 158012 (-)
Gene ID: HRGMv2_0861_1_153
Type: TF
Location: 158370 - 159374 (+)
Gene ID: HRGMv2_0861_1_154
Type: TC
Location: 159589 - 159927 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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