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Cluster: HRGMv2_0861_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0861_14 HRGMv2_0861_14_17 16702 17628 - CE7
TC HRGMv2_0861_14 HRGMv2_0861_14_18 17760 18587 - 3.A.1.5.27
TC HRGMv2_0861_14 HRGMv2_0861_14_19 18588 20603 - 3.A.1.5.25
TC HRGMv2_0861_14 HRGMv2_0861_14_20 20607 21563 - 3.A.1.5.38
TC HRGMv2_0861_14 HRGMv2_0861_14_21 21719 23332 - 3.A.1.5.27
pfam HRGMv2_0861_14 HRGMv2_0861_14_22 23698 25638 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0861_14 HRGMv2_0861_14_23 25645 27327 - 2.A.66.4.4
Gene ID: HRGMv2_0861_14_17
Type: CAZyme
Location: 16702 - 17628 (-)
Gene ID: HRGMv2_0861_14_18
Type: TC
Location: 17760 - 18587 (-)
Gene ID: HRGMv2_0861_14_19
Type: TC
Location: 18588 - 20603 (-)
Gene ID: HRGMv2_0861_14_20
Type: TC
Location: 20607 - 21563 (-)
Gene ID: HRGMv2_0861_14_21
Type: TC
Location: 21719 - 23332 (-)
Gene ID: HRGMv2_0861_14_22
Type: pfam
Location: 23698 - 25638 (-)
Gene ID: HRGMv2_0861_14_23
Type: TC
Location: 25645 - 27327 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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