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Cluster: HRGMv2_0861_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0861_1 HRGMv2_0861_1_114 121956 122399 + 4.A.6.1.16
pfam HRGMv2_0861_1 HRGMv2_0861_1_115 122399 122680 + YajC
TC HRGMv2_0861_1 HRGMv2_0861_1_116 122717 123199 + 4.A.6.1.4
TC HRGMv2_0861_1 HRGMv2_0861_1_117 123290 124090 + 4.A.6.1.4
TC HRGMv2_0861_1 HRGMv2_0861_1_118 124080 125162 + 4.A.6.1.4
TF HRGMv2_0861_1 HRGMv2_0861_1_119 125347 126078 + GntR
STP HRGMv2_0861_1 HRGMv2_0861_1_120 126193 127359 + SIS | SIS
CAZyme HRGMv2_0861_1 HRGMv2_0861_1_121 127477 128646 + CE9
Gene ID: HRGMv2_0861_1_114
Type: TC
Location: 121956 - 122399 (+)
Gene ID: HRGMv2_0861_1_115
Type: pfam
Location: 122399 - 122680 (+)
Gene ID: HRGMv2_0861_1_116
Type: TC
Location: 122717 - 123199 (+)
Gene ID: HRGMv2_0861_1_117
Type: TC
Location: 123290 - 124090 (+)
Gene ID: HRGMv2_0861_1_118
Type: TC
Location: 124080 - 125162 (+)
Gene ID: HRGMv2_0861_1_119
Type: TF
Location: 125347 - 126078 (+)
Gene ID: HRGMv2_0861_1_120
Type: STP
Location: 126193 - 127359 (+)
Gene ID: HRGMv2_0861_1_121
Type: CAZyme
Location: 127477 - 128646 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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