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Cluster: HRGMv2_0861_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0861_12 HRGMv2_0861_12_36 47985 49034 - GT2
CAZyme HRGMv2_0861_12 HRGMv2_0861_12_37 49063 49917 - GT8
CAZyme HRGMv2_0861_12 HRGMv2_0861_12_38 49919 50716 - GT32
pfam HRGMv2_0861_12 HRGMv2_0861_12_39 50746 51840 - EpsG
CAZyme HRGMv2_0861_12 HRGMv2_0861_12_40 51893 53038 - GT4
CAZyme HRGMv2_0861_12 HRGMv2_0861_12_41 53111 54130 - GT2
CAZyme HRGMv2_0861_12 HRGMv2_0861_12_42 54123 55022 - GT2
TC HRGMv2_0861_12 HRGMv2_0861_12_43 55019 55822 - 9.B.18.1.2
Gene ID: HRGMv2_0861_12_36
Type: CAZyme
Location: 47985 - 49034 (-)
Gene ID: HRGMv2_0861_12_37
Type: CAZyme
Location: 49063 - 49917 (-)
Gene ID: HRGMv2_0861_12_38
Type: CAZyme
Location: 49919 - 50716 (-)
Gene ID: HRGMv2_0861_12_39
Type: pfam
Location: 50746 - 51840 (-)
Gene ID: HRGMv2_0861_12_40
Type: CAZyme
Location: 51893 - 53038 (-)
Gene ID: HRGMv2_0861_12_41
Type: CAZyme
Location: 53111 - 54130 (-)
Gene ID: HRGMv2_0861_12_42
Type: CAZyme
Location: 54123 - 55022 (-)
Gene ID: HRGMv2_0861_12_43
Type: TC
Location: 55019 - 55822 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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