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Cluster: HRGMv2_0861_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0861_5 HRGMv2_0861_5_12 13488 14867 - 3.A.1.17.10
NULL(UNKNOWN) HRGMv2_0861_5 HRGMv2_0861_5_13 14871 15926 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0861_5 HRGMv2_0861_5_14 15929 17740 - 3.D.1.5.1
STP HRGMv2_0861_5 HRGMv2_0861_5_15 17734 19566 - Pyr_redox_2
CAZyme HRGMv2_0861_5 HRGMv2_0861_5_16 19823 21205 - GH4
TC HRGMv2_0861_5 HRGMv2_0861_5_17 21209 22825 - 4.A.1.1.3
pfam HRGMv2_0861_5 HRGMv2_0861_5_18 22925 23791 - PRD | PRD | CAT_RBD
TC HRGMv2_0861_5 HRGMv2_0861_5_19 23798 24310 - 4.A.1.2.5
STP HRGMv2_0861_5 HRGMv2_0861_5_20 24654 25415 - Fer4
TC HRGMv2_0861_5 HRGMv2_0861_5_21 26037 28286 - 1.I.1.1.3
STP HRGMv2_0861_5 HRGMv2_0861_5_22 28874 29836 + FHA
STP HRGMv2_0861_5 HRGMv2_0861_5_23 30008 32092 + Pkinase
TC HRGMv2_0861_5 HRGMv2_0861_5_24 32746 35085 + 3.A.3.5.15
Gene ID: HRGMv2_0861_5_12
Type: TC
Location: 13488 - 14867 (-)
Gene ID: HRGMv2_0861_5_13
Type:
Location: 14871 - 15926 (-)
Gene ID: HRGMv2_0861_5_14
Type: TC
Location: 15929 - 17740 (-)
Gene ID: HRGMv2_0861_5_15
Type: STP
Location: 17734 - 19566 (-)
Gene ID: HRGMv2_0861_5_16
Type: CAZyme
Location: 19823 - 21205 (-)
Gene ID: HRGMv2_0861_5_17
Type: TC
Location: 21209 - 22825 (-)
Gene ID: HRGMv2_0861_5_18
Type: pfam
Location: 22925 - 23791 (-)
Gene ID: HRGMv2_0861_5_19
Type: TC
Location: 23798 - 24310 (-)
Gene ID: HRGMv2_0861_5_20
Type: STP
Location: 24654 - 25415 (-)
Gene ID: HRGMv2_0861_5_21
Type: TC
Location: 26037 - 28286 (-)
Gene ID: HRGMv2_0861_5_22
Type: STP
Location: 28874 - 29836 (+)
Gene ID: HRGMv2_0861_5_23
Type: STP
Location: 30008 - 32092 (+)
Gene ID: HRGMv2_0861_5_24
Type: TC
Location: 32746 - 35085 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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