dbCAN Logo

Cluster: HRGMv2_0861_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0861_1 HRGMv2_0861_1_11 14409 16859 - 4.A.1.1.8
TF HRGMv2_0861_1 HRGMv2_0861_1_12 17089 17808 + GntR
TC HRGMv2_0861_1 HRGMv2_0861_1_13 18116 19432 + 3.A.1.1.45
TC HRGMv2_0861_1 HRGMv2_0861_1_14 19520 20374 + 3.A.1.1.45
TC HRGMv2_0861_1 HRGMv2_0861_1_15 20374 21213 + 3.A.1.1.45
TC HRGMv2_0861_1 HRGMv2_0861_1_16 21282 22481 + 3.A.1.1.22
CAZyme HRGMv2_0861_1 HRGMv2_0861_1_17 22939 25206 - GT35
CAZyme HRGMv2_0861_1 HRGMv2_0861_1_18 25335 26840 - GH77
Gene ID: HRGMv2_0861_1_11
Type: TC
Location: 14409 - 16859 (-)
Gene ID: HRGMv2_0861_1_12
Type: TF
Location: 17089 - 17808 (+)
Gene ID: HRGMv2_0861_1_13
Type: TC
Location: 18116 - 19432 (+)
Gene ID: HRGMv2_0861_1_14
Type: TC
Location: 19520 - 20374 (+)
Gene ID: HRGMv2_0861_1_15
Type: TC
Location: 20374 - 21213 (+)
Gene ID: HRGMv2_0861_1_16
Type: TC
Location: 21282 - 22481 (+)
Gene ID: HRGMv2_0861_1_17
Type: CAZyme
Location: 22939 - 25206 (-)
Gene ID: HRGMv2_0861_1_18
Type: CAZyme
Location: 25335 - 26840 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List