Cluster: HRGMv2_0830_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0830
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0830_11 | HRGMv2_0830_11_27 | 29816 | 31264 | + | 4.A.2.1.6 |
| TC | HRGMv2_0830_11 | HRGMv2_0830_11_28 | 31295 | 31741 | + | 4.A.2.1.4 |
| pfam | HRGMv2_0830_11 | HRGMv2_0830_11_29 | 31944 | 32795 | + | DegV |
| pfam | HRGMv2_0830_11 | HRGMv2_0830_11_30 | 32808 | 33302 | + | DUF1836 |
| CAZyme | HRGMv2_0830_11 | HRGMv2_0830_11_31 | 33604 | 35445 | + | CBM48 | GH13_9 |
Gene ID: HRGMv2_0830_11_27
Type: TC
Location: 29816 - 31264 (+)
Type: TC
Location: 29816 - 31264 (+)
Gene ID: HRGMv2_0830_11_28
Type: TC
Location: 31295 - 31741 (+)
Type: TC
Location: 31295 - 31741 (+)
Gene ID: HRGMv2_0830_11_29
Type: pfam
Location: 31944 - 32795 (+)
Type: pfam
Location: 31944 - 32795 (+)
Gene ID: HRGMv2_0830_11_30
Type: pfam
Location: 32808 - 33302 (+)
Type: pfam
Location: 32808 - 33302 (+)
Gene ID: HRGMv2_0830_11_31
Type: CAZyme
Location: 33604 - 35445 (+)
Type: CAZyme
Location: 33604 - 35445 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium saudiense
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.