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Cluster: HRGMv2_0830_CGC53

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0830_71 HRGMv2_0830_71_69 74880 76973 + 3.A.16.1.2
pfam HRGMv2_0830_71 HRGMv2_0830_71_70 77144 79249 + UvrD-helicase | AAA_19
TC HRGMv2_0830_71 HRGMv2_0830_71_71 79582 79887 + 4.A.3.2.8
TC HRGMv2_0830_71 HRGMv2_0830_71_72 79970 81292 + 4.A.3.2.8
CAZyme HRGMv2_0830_71 HRGMv2_0830_71_73 81550 82857 + GH4
pfam HRGMv2_0830_71 HRGMv2_0830_71_74 82871 83605 + YdjC
TC HRGMv2_0830_71 HRGMv2_0830_71_75 83618 83944 + 4.A.3.2.2
TF HRGMv2_0830_71 HRGMv2_0830_71_76 84159 84863 + GntR
TC HRGMv2_0830_71 HRGMv2_0830_71_77 85410 86852 + 2.A.118.1.8
Gene ID: HRGMv2_0830_71_69
Type: TC
Location: 74880 - 76973 (+)
Gene ID: HRGMv2_0830_71_70
Type: pfam
Location: 77144 - 79249 (+)
Gene ID: HRGMv2_0830_71_71
Type: TC
Location: 79582 - 79887 (+)
Gene ID: HRGMv2_0830_71_72
Type: TC
Location: 79970 - 81292 (+)
Gene ID: HRGMv2_0830_71_73
Type: CAZyme
Location: 81550 - 82857 (+)
Gene ID: HRGMv2_0830_71_74
Type: pfam
Location: 82871 - 83605 (+)
Gene ID: HRGMv2_0830_71_75
Type: TC
Location: 83618 - 83944 (+)
Gene ID: HRGMv2_0830_71_76
Type: TF
Location: 84159 - 84863 (+)
Gene ID: HRGMv2_0830_71_77
Type: TC
Location: 85410 - 86852 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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