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Cluster: HRGMv2_0830_CGC48

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0830_64 HRGMv2_0830_64_30 28813 30174 + 2.A.23.1.5
NULL(UNKNOWN) HRGMv2_0830_64 HRGMv2_0830_64_31 30224 30979 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0830_64 HRGMv2_0830_64_32 30981 31853 - 3.A.1.132.1
TF HRGMv2_0830_64 HRGMv2_0830_64_33 31858 32220 - GntR
STP HRGMv2_0830_64 HRGMv2_0830_64_34 32614 33171 + CYTH
CAZyme HRGMv2_0830_64 HRGMv2_0830_64_35 33537 34529 - CE4
CAZyme HRGMv2_0830_64 HRGMv2_0830_64_36 34799 35800 - CE4
Gene ID: HRGMv2_0830_64_30
Type: TC
Location: 28813 - 30174 (+)
Gene ID: HRGMv2_0830_64_31
Type:
Location: 30224 - 30979 (-)
Gene ID: HRGMv2_0830_64_32
Type: TC
Location: 30981 - 31853 (-)
Gene ID: HRGMv2_0830_64_33
Type: TF
Location: 31858 - 32220 (-)
Gene ID: HRGMv2_0830_64_34
Type: STP
Location: 32614 - 33171 (+)
Gene ID: HRGMv2_0830_64_35
Type: CAZyme
Location: 33537 - 34529 (-)
Gene ID: HRGMv2_0830_64_36
Type: CAZyme
Location: 34799 - 35800 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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