Cluster: HRGMv2_0830_CGC40
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0830
- CGC Family ID: CGCFAM_05634
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0830_58 | HRGMv2_0830_58_17 | 16612 | 18240 | - | GH13_31 |
| TC | HRGMv2_0830_58 | HRGMv2_0830_58_18 | 18636 | 19502 | - | 2.A.7.2.1 |
| pfam | HRGMv2_0830_58 | HRGMv2_0830_58_19 | 19618 | 21294 | - | GH3 | GH3_M | GH3_C |
| TC | HRGMv2_0830_58 | HRGMv2_0830_58_20 | 21396 | 22562 | - | 2.A.33.1.1 |
| TC | HRGMv2_0830_58 | HRGMv2_0830_58_21 | 22727 | 24658 | - | 4.A.2.1.4 |
Gene ID: HRGMv2_0830_58_17
Type: CAZyme
Location: 16612 - 18240 (-)
Type: CAZyme
Location: 16612 - 18240 (-)
Gene ID: HRGMv2_0830_58_18
Type: TC
Location: 18636 - 19502 (-)
Type: TC
Location: 18636 - 19502 (-)
Gene ID: HRGMv2_0830_58_19
Type: pfam
Location: 19618 - 21294 (-)
Type: pfam
Location: 19618 - 21294 (-)
Gene ID: HRGMv2_0830_58_20
Type: TC
Location: 21396 - 22562 (-)
Type: TC
Location: 21396 - 22562 (-)
Gene ID: HRGMv2_0830_58_21
Type: TC
Location: 22727 - 24658 (-)
Type: TC
Location: 22727 - 24658 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium saudiense
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0830_58_17 | vegan > omnivore | 2.48822 | 0.01479 |