Cluster: HRGMv2_0830_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0830
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0830_10 | HRGMv2_0830_10_12 | 12570 | 14192 | - | 2.A.21.9.1 |
| TF | HRGMv2_0830_10 | HRGMv2_0830_10_13 | 14179 | 14874 | - | Trans_reg_C |
| TC | HRGMv2_0830_10 | HRGMv2_0830_10_14 | 14897 | 16183 | - | 3.A.1.122.2 |
| TC | HRGMv2_0830_10 | HRGMv2_0830_10_15 | 16183 | 17163 | - | 3.A.1.122.2 |
| pfam | HRGMv2_0830_10 | HRGMv2_0830_10_16 | 17150 | 18742 | - | HlyD_3 | Biotin_lipoyl_2 | HlyD_D23 |
| CAZyme | HRGMv2_0830_10 | HRGMv2_0830_10_17 | 18920 | 21313 | - | CBM77 | PL1 |
Gene ID: HRGMv2_0830_10_12
Type: TC
Location: 12570 - 14192 (-)
Type: TC
Location: 12570 - 14192 (-)
Gene ID: HRGMv2_0830_10_13
Type: TF
Location: 14179 - 14874 (-)
Type: TF
Location: 14179 - 14874 (-)
Gene ID: HRGMv2_0830_10_14
Type: TC
Location: 14897 - 16183 (-)
Type: TC
Location: 14897 - 16183 (-)
Gene ID: HRGMv2_0830_10_15
Type: TC
Location: 16183 - 17163 (-)
Type: TC
Location: 16183 - 17163 (-)
Gene ID: HRGMv2_0830_10_16
Type: pfam
Location: 17150 - 18742 (-)
Type: pfam
Location: 17150 - 18742 (-)
Gene ID: HRGMv2_0830_10_17
Type: CAZyme
Location: 18920 - 21313 (-)
Type: CAZyme
Location: 18920 - 21313 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium saudiense
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.