Cluster: HRGMv2_0830_CGC38
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0830
- CGC Family ID: CGCFAM_06560
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0830_56 | HRGMv2_0830_56_22 | 19974 | 20810 | + | GT11 |
| CAZyme | HRGMv2_0830_56 | HRGMv2_0830_56_23 | 20901 | 22781 | - | GT2 | GT4 |
| pfam | HRGMv2_0830_56 | HRGMv2_0830_56_24 | 23272 | 23961 | + | Glycos_transf_1 | Glyco_trans_1_4 | GT4-conflict |
| CAZyme | HRGMv2_0830_56 | HRGMv2_0830_56_25 | 24161 | 25378 | - | GT2 |
| TC | HRGMv2_0830_56 | HRGMv2_0830_56_26 | 25488 | 26768 | + | 2.A.85.4.3 |
Gene ID: HRGMv2_0830_56_22
Type: CAZyme
Location: 19974 - 20810 (+)
Type: CAZyme
Location: 19974 - 20810 (+)
Gene ID: HRGMv2_0830_56_23
Type: CAZyme
Location: 20901 - 22781 (-)
Type: CAZyme
Location: 20901 - 22781 (-)
Gene ID: HRGMv2_0830_56_24
Type: pfam
Location: 23272 - 23961 (+)
Type: pfam
Location: 23272 - 23961 (+)
Gene ID: HRGMv2_0830_56_25
Type: CAZyme
Location: 24161 - 25378 (-)
Type: CAZyme
Location: 24161 - 25378 (-)
Gene ID: HRGMv2_0830_56_26
Type: TC
Location: 25488 - 26768 (+)
Type: TC
Location: 25488 - 26768 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium saudiense
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.