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Cluster: HRGMv2_0830_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0830_28 HRGMv2_0830_28_39 31428 32366 - GH43_26
TF HRGMv2_0830_28 HRGMv2_0830_28_40 32396 33334 - HTH_5
TC HRGMv2_0830_28 HRGMv2_0830_28_41 33629 34522 - 3.A.1.1.34
TC HRGMv2_0830_28 HRGMv2_0830_28_42 34526 35419 - 3.A.1.1.34
TC HRGMv2_0830_28 HRGMv2_0830_28_43 35494 36900 - 3.A.1.1.34
CAZyme HRGMv2_0830_28 HRGMv2_0830_28_44 37222 39180 - GH127
TF HRGMv2_0830_28 HRGMv2_0830_28_45 39427 40461 - LacI
TC HRGMv2_0830_28 HRGMv2_0830_28_46 40613 41455 - 3.A.1.132.3
Gene ID: HRGMv2_0830_28_39
Type: CAZyme
Location: 31428 - 32366 (-)
Gene ID: HRGMv2_0830_28_40
Type: TF
Location: 32396 - 33334 (-)
Gene ID: HRGMv2_0830_28_41
Type: TC
Location: 33629 - 34522 (-)
Gene ID: HRGMv2_0830_28_42
Type: TC
Location: 34526 - 35419 (-)
Gene ID: HRGMv2_0830_28_43
Type: TC
Location: 35494 - 36900 (-)
Gene ID: HRGMv2_0830_28_44
Type: CAZyme
Location: 37222 - 39180 (-)
Gene ID: HRGMv2_0830_28_45
Type: TF
Location: 39427 - 40461 (-)
Gene ID: HRGMv2_0830_28_46
Type: TC
Location: 40613 - 41455 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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