Cluster: HRGMv2_0830_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0830
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0830_19 | HRGMv2_0830_19_1 | 2 | 5098 | + | CBM32 | CBM51 | CBM51 | CBM51 |
| STP | HRGMv2_0830_19 | HRGMv2_0830_19_2 | 5357 | 6328 | + | PfkB |
| CAZyme | HRGMv2_0830_19 | HRGMv2_0830_19_3 | 6331 | 7758 | + | GH32 |
| pfam | HRGMv2_0830_19 | HRGMv2_0830_19_4 | 8139 | 9656 | + | WG_beta_rep | WG_beta_rep |
| TF | HRGMv2_0830_19 | HRGMv2_0830_19_5 | 11372 | 12127 | + | Trans_reg_C |
| TC | HRGMv2_0830_19 | HRGMv2_0830_19_6 | 12084 | 13400 | + | 2.A.21.9.2 |
| TC | HRGMv2_0830_19 | HRGMv2_0830_19_7 | 13568 | 14242 | + | 3.A.1.125.3 |
Gene ID: HRGMv2_0830_19_1
Type: CAZyme
Location: 2 - 5098 (+)
Type: CAZyme
Location: 2 - 5098 (+)
Gene ID: HRGMv2_0830_19_2
Type: STP
Location: 5357 - 6328 (+)
Type: STP
Location: 5357 - 6328 (+)
Gene ID: HRGMv2_0830_19_3
Type: CAZyme
Location: 6331 - 7758 (+)
Type: CAZyme
Location: 6331 - 7758 (+)
Gene ID: HRGMv2_0830_19_4
Type: pfam
Location: 8139 - 9656 (+)
Type: pfam
Location: 8139 - 9656 (+)
Gene ID: HRGMv2_0830_19_5
Type: TF
Location: 11372 - 12127 (+)
Type: TF
Location: 11372 - 12127 (+)
Gene ID: HRGMv2_0830_19_6
Type: TC
Location: 12084 - 13400 (+)
Type: TC
Location: 12084 - 13400 (+)
Gene ID: HRGMv2_0830_19_7
Type: TC
Location: 13568 - 14242 (+)
Type: TC
Location: 13568 - 14242 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium saudiense
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.