Cluster: HRGMv2_0829_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0829
- CGC Family ID: CGCFAM_06567
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0829_4 | HRGMv2_0829_4_106 | 112558 | 115539 | - | GH73 |
| NULL(UNKNOWN) | HRGMv2_0829_4 | HRGMv2_0829_4_107 | 115652 | 116263 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0829_4 | HRGMv2_0829_4_108 | 116355 | 116981 | - | 9.B.18.1.2 |
| pfam | HRGMv2_0829_4 | HRGMv2_0829_4_109 | 117155 | 118189 | - | Glyco_trans_1_2 |
| CAZyme | HRGMv2_0829_4 | HRGMv2_0829_4_110 | 118217 | 119170 | - | GT2 |
| CAZyme | HRGMv2_0829_4 | HRGMv2_0829_4_111 | 119204 | 120019 | - | GT2 |
Gene ID: HRGMv2_0829_4_106
Type: CAZyme
Location: 112558 - 115539 (-)
Type: CAZyme
Location: 112558 - 115539 (-)
Gene ID: HRGMv2_0829_4_107
Type:
Location: 115652 - 116263 (-)
Type:
Location: 115652 - 116263 (-)
Gene ID: HRGMv2_0829_4_108
Type: TC
Location: 116355 - 116981 (-)
Type: TC
Location: 116355 - 116981 (-)
Gene ID: HRGMv2_0829_4_109
Type: pfam
Location: 117155 - 118189 (-)
Type: pfam
Location: 117155 - 118189 (-)
Gene ID: HRGMv2_0829_4_110
Type: CAZyme
Location: 118217 - 119170 (-)
Type: CAZyme
Location: 118217 - 119170 (-)
Gene ID: HRGMv2_0829_4_111
Type: CAZyme
Location: 119204 - 120019 (-)
Type: CAZyme
Location: 119204 - 120019 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp000435835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0829_4_110 | vegan > omnivore | 3.64567 | 0.00224 |