Cluster: HRGMv2_0829_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0829
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0829_4 | HRGMv2_0829_4_4 | 4610 | 6064 | - | GH1 |
| TF | HRGMv2_0829_4 | HRGMv2_0829_4_5 | 6215 | 6955 | - | HTH_DeoR |
| pfam | HRGMv2_0829_4 | HRGMv2_0829_4_6 | 7117 | 8142 | - | LytR_cpsA_psr |
| TC | HRGMv2_0829_4 | HRGMv2_0829_4_7 | 8229 | 10112 | - | 9.B.97.5.1 |
Gene ID: HRGMv2_0829_4_4
Type: CAZyme
Location: 4610 - 6064 (-)
Type: CAZyme
Location: 4610 - 6064 (-)
Gene ID: HRGMv2_0829_4_5
Type: TF
Location: 6215 - 6955 (-)
Type: TF
Location: 6215 - 6955 (-)
Gene ID: HRGMv2_0829_4_6
Type: pfam
Location: 7117 - 8142 (-)
Type: pfam
Location: 7117 - 8142 (-)
Gene ID: HRGMv2_0829_4_7
Type: TC
Location: 8229 - 10112 (-)
Type: TC
Location: 8229 - 10112 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp000435835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0829_4_5 | vegan > omnivore | 20.02430 | 0.00224 |