Cluster: HRGMv2_0829_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0829
- CGC Family ID: CGCFAM_04422
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0829_3 | HRGMv2_0829_3_217 | 212121 | 212978 | - | GT28 |
| NULL(UNKNOWN) | HRGMv2_0829_3 | HRGMv2_0829_3_218 | 213021 | 213635 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0829_3 | HRGMv2_0829_3_219 | 213632 | 214597 | - | 9.B.104.1.3 |
Gene ID: HRGMv2_0829_3_217
Type: CAZyme
Location: 212121 - 212978 (-)
Type: CAZyme
Location: 212121 - 212978 (-)
Gene ID: HRGMv2_0829_3_218
Type:
Location: 213021 - 213635 (-)
Type:
Location: 213021 - 213635 (-)
Gene ID: HRGMv2_0829_3_219
Type: TC
Location: 213632 - 214597 (-)
Type: TC
Location: 213632 - 214597 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp000435835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0829_3_217 | vegan > omnivore | 1.45597 | 0.00224 |
| HRGMv2_0829_3_218 | vegan > omnivore | 3.96975 | 0.00224 |