Cluster: HRGMv2_0829_CGC35
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0829
- CGC Family ID: CGCFAM_09806
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0829_50 | HRGMv2_0829_50_1 | 345 | 1523 | - | GH130_1 |
| pfam | HRGMv2_0829_50 | HRGMv2_0829_50_2 | 1527 | 2699 | - | GlcNAc_2-epim |
| CAZyme | HRGMv2_0829_50 | HRGMv2_0829_50_3 | 2943 | 3884 | - | GH113 |
| NULL(UNKNOWN) | HRGMv2_0829_50 | HRGMv2_0829_50_4 | 3900 | 4502 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0829_50 | HRGMv2_0829_50_5 | 4673 | 5563 | - | 3.A.1.1.2 |
| TC | HRGMv2_0829_50 | HRGMv2_0829_50_6 | 5553 | 6437 | - | 3.A.1.1.28 |
Gene ID: HRGMv2_0829_50_1
Type: CAZyme
Location: 345 - 1523 (-)
Type: CAZyme
Location: 345 - 1523 (-)
Gene ID: HRGMv2_0829_50_2
Type: pfam
Location: 1527 - 2699 (-)
Type: pfam
Location: 1527 - 2699 (-)
Gene ID: HRGMv2_0829_50_3
Type: CAZyme
Location: 2943 - 3884 (-)
Type: CAZyme
Location: 2943 - 3884 (-)
Gene ID: HRGMv2_0829_50_4
Type:
Location: 3900 - 4502 (-)
Type:
Location: 3900 - 4502 (-)
Gene ID: HRGMv2_0829_50_5
Type: TC
Location: 4673 - 5563 (-)
Type: TC
Location: 4673 - 5563 (-)
Gene ID: HRGMv2_0829_50_6
Type: TC
Location: 5553 - 6437 (-)
Type: TC
Location: 5553 - 6437 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp000435835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.