Cluster: HRGMv2_0829_CGC34
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate: beta-mannan
- Genome ID: HRGMv2_0829
- CGC Family ID: CGCFAM_01490
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0829_43 | HRGMv2_0829_43_1 | 266 | 2452 | + | GH36 |
| CAZyme | HRGMv2_0829_43 | HRGMv2_0829_43_2 | 2777 | 6277 | + | CBM23 | CBM27 | CBM27 | GH26 |
| TC | HRGMv2_0829_43 | HRGMv2_0829_43_3 | 6361 | 8127 | - | 8.A.59.2.1 |
Gene ID: HRGMv2_0829_43_1
Type: CAZyme
Location: 266 - 2452 (+)
Type: CAZyme
Location: 266 - 2452 (+)
Gene ID: HRGMv2_0829_43_2
Type: CAZyme
Location: 2777 - 6277 (+)
Type: CAZyme
Location: 2777 - 6277 (+)
Gene ID: HRGMv2_0829_43_3
Type: TC
Location: 6361 - 8127 (-)
Type: TC
Location: 6361 - 8127 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp000435835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.