Cluster: HRGMv2_0829_CGC33
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0829
- CGC Family ID: CGCFAM_00334
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0829_34 | HRGMv2_0829_34_1 | 482 | 1846 | + | 2.A.2.3.3 |
| TF | HRGMv2_0829_34 | HRGMv2_0829_34_2 | 1908 | 2741 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_0829_34 | HRGMv2_0829_34_3 | 2935 | 5967 | + | GH2 |
Gene ID: HRGMv2_0829_34_1
Type: TC
Location: 482 - 1846 (+)
Type: TC
Location: 482 - 1846 (+)
Gene ID: HRGMv2_0829_34_2
Type: TF
Location: 1908 - 2741 (-)
Type: TF
Location: 1908 - 2741 (-)
Gene ID: HRGMv2_0829_34_3
Type: CAZyme
Location: 2935 - 5967 (+)
Type: CAZyme
Location: 2935 - 5967 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp000435835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0829_34_3 | vegetarian > omnivore | 1.84259 | 0.01926 |