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Cluster: HRGMv2_0829_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0829_8 HRGMv2_0829_8_101 120501 122447 + 9.B.18.2.1
pfam HRGMv2_0829_8 HRGMv2_0829_8_102 122476 123618 + DegT_DnrJ_EryC1
TC HRGMv2_0829_8 HRGMv2_0829_8_103 123695 124255 + 9.B.18.1.2
pfam HRGMv2_0829_8 HRGMv2_0829_8_104 124278 124973 + Wzz
TC HRGMv2_0829_8 HRGMv2_0829_8_105 124964 125653 + 8.A.3.2.1
pfam HRGMv2_0829_8 HRGMv2_0829_8_106 125666 126343 + PglD_N
CAZyme HRGMv2_0829_8 HRGMv2_0829_8_107 126309 127466 + GT4
CAZyme HRGMv2_0829_8 HRGMv2_0829_8_108 127485 128672 + GT4
CAZyme HRGMv2_0829_8 HRGMv2_0829_8_109 128626 129699 + GT2
CAZyme HRGMv2_0829_8 HRGMv2_0829_8_110 129720 130871 + GT4
CAZyme HRGMv2_0829_8 HRGMv2_0829_8_111 130837 131721 + GT2
pfam HRGMv2_0829_8 HRGMv2_0829_8_112 131746 132816 + EpsG
CAZyme HRGMv2_0829_8 HRGMv2_0829_8_113 132839 133963 + GT4
CAZyme HRGMv2_0829_8 HRGMv2_0829_8_114 133983 135173 + GT4
CAZyme HRGMv2_0829_8 HRGMv2_0829_8_115 135189 136223 + GT2
pfam HRGMv2_0829_8 HRGMv2_0829_8_116 136242 137399 + Glyphos_transf
pfam HRGMv2_0829_8 HRGMv2_0829_8_117 137414 137836 + CTP_transf_like
CAZyme HRGMv2_0829_8 HRGMv2_0829_8_118 137854 138843 + GT2
pfam HRGMv2_0829_8 HRGMv2_0829_8_119 138862 139797 + YdjC
CAZyme HRGMv2_0829_8 HRGMv2_0829_8_120 139817 140803 + GT2
CAZyme HRGMv2_0829_8 HRGMv2_0829_8_121 140808 141995 + GT4
CAZyme HRGMv2_0829_8 HRGMv2_0829_8_122 142004 143191 + GT4
CAZyme HRGMv2_0829_8 HRGMv2_0829_8_123 143218 144405 + GT4
TC HRGMv2_0829_8 HRGMv2_0829_8_124 144424 145980 + 2.A.66.1.40
Gene ID: HRGMv2_0829_8_101
Type: TC
Location: 120501 - 122447 (+)
Gene ID: HRGMv2_0829_8_102
Type: pfam
Location: 122476 - 123618 (+)
Gene ID: HRGMv2_0829_8_103
Type: TC
Location: 123695 - 124255 (+)
Gene ID: HRGMv2_0829_8_104
Type: pfam
Location: 124278 - 124973 (+)
Gene ID: HRGMv2_0829_8_105
Type: TC
Location: 124964 - 125653 (+)
Gene ID: HRGMv2_0829_8_106
Type: pfam
Location: 125666 - 126343 (+)
Gene ID: HRGMv2_0829_8_107
Type: CAZyme
Location: 126309 - 127466 (+)
Gene ID: HRGMv2_0829_8_108
Type: CAZyme
Location: 127485 - 128672 (+)
Gene ID: HRGMv2_0829_8_109
Type: CAZyme
Location: 128626 - 129699 (+)
Gene ID: HRGMv2_0829_8_110
Type: CAZyme
Location: 129720 - 130871 (+)
Gene ID: HRGMv2_0829_8_111
Type: CAZyme
Location: 130837 - 131721 (+)
Gene ID: HRGMv2_0829_8_112
Type: pfam
Location: 131746 - 132816 (+)
Gene ID: HRGMv2_0829_8_113
Type: CAZyme
Location: 132839 - 133963 (+)
Gene ID: HRGMv2_0829_8_114
Type: CAZyme
Location: 133983 - 135173 (+)
Gene ID: HRGMv2_0829_8_115
Type: CAZyme
Location: 135189 - 136223 (+)
Gene ID: HRGMv2_0829_8_116
Type: pfam
Location: 136242 - 137399 (+)
Gene ID: HRGMv2_0829_8_117
Type: pfam
Location: 137414 - 137836 (+)
Gene ID: HRGMv2_0829_8_118
Type: CAZyme
Location: 137854 - 138843 (+)
Gene ID: HRGMv2_0829_8_119
Type: pfam
Location: 138862 - 139797 (+)
Gene ID: HRGMv2_0829_8_120
Type: CAZyme
Location: 139817 - 140803 (+)
Gene ID: HRGMv2_0829_8_121
Type: CAZyme
Location: 140808 - 141995 (+)
Gene ID: HRGMv2_0829_8_122
Type: CAZyme
Location: 142004 - 143191 (+)
Gene ID: HRGMv2_0829_8_123
Type: CAZyme
Location: 143218 - 144405 (+)
Gene ID: HRGMv2_0829_8_124
Type: TC
Location: 144424 - 145980 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0829_8_104 vegan > omnivore 6.07961 0.00224

🧭 Explore Read Mapping of CGC

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